Insertion junction: CLIP2.030785_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.030785
Chromosome:chromosome 8
Location:3657871
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g379950 PFH17,P4H17,PHX12 Prolyl 4-hydroxylase 17; (1 of 2) PTHR10869//PTHR10869:SF79 - PROLYL 4-HYDROXYLASE ALPHA SUBUNIT // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGACCACCCCGGGCTTAGGTGAGAGCGGGTGGGGAGGGGAGGGCACTA
Internal bar code:CAGCGATAAAATGCCGGCGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:466
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGCAATAGCAGGGAGTTG
Suggested primer 2:TTCTGACCACCACTTACCGC