Insertion junction: CLIP2.030787_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.030787
Chromosome:chromosome 2
Location:367870
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g075550 (1 of 1) PTHR28532//PTHR28532:SF1 - FAMILY NOT NAMED // ORAL CANCER-OVEREXPRESSED PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGTATCATAATTGCGCGACATCACAGCTGTGATGGTGGAATATTCTG
Internal bar code:TTTGGCTACCTCCCTCACACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:896
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGTAGATGACCTCTTCGG
Suggested primer 2:TCTGGGCTTAGGCTGAGGAT