Insertion junction: CLIP2.030788_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.030788
Chromosome:chromosome 14
Location:216808
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g609030 (1 of 3) 3.5.5.1 - Nitrilase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTATCGCGGGTAAGTATGACTACCTGGGTGACGACAACCACGCGACGC
Internal bar code:CCCTCCATCTATCAATTATACG

Confirmation - LEAP-Seq

LEAP-Seq distance:494
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGCAATGCACGGGACTTG
Suggested primer 2:TCCGTCTCACGTTCTTTGGG