Insertion junction: CLIP2.030795_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.030795
Chromosome:chromosome 12
Location:2255098
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g508644 HDG1 (1 of 1) PTHR11850//PTHR11850:SF132 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // BEL1-LIKE HOMEODOMAIN PROTEIN 11; BELL-related homeodomain protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCTGCTGCTGAAGGTAGCTGGTGGCTCCGGGTGAGCGGCGCGAAAGTG
Internal bar code:TACAGAGGTTCCCGTAGTAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1867
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CCCATGTCCACGTGTACCAA
Suggested primer 2:GCCATCACGAGCAGCTATGT