Insertion junction: CLIP2.030799_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.030799
Chromosome:chromosome 6
Location:7315974
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g299476 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCAAGCGGCCTTCCCGCCAGTGCAGCAGTCGGTGTCAGCTATGCTCGC
Internal bar code:GTTTATGTAATTTTTGGGCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1274
LEAP-Seq percent confirming:80.5556
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:TCCATTGCGTCACCAGTACC
Suggested primer 2:AAGGGCTGGGATCCATTGTG