Insertion junction: CLIP2.030802_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.030802
Chromosome:chromosome 3
Location:5634274
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g186100 (1 of 13) IPR005123//IPR006620 - Oxoglutarate/iron-dependent dioxygenase // Prolyl 4-hydroxylase, alpha subunit CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAACATCTCGCACTCCTTCTCCTCCGTCAAGCAGGCTAACGGGCTGGAT
Internal bar code:CACTTTTTTTCGGATCAGCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:5251
LEAP-Seq percent confirming:98.2759
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCAGTTCGTGTGCCATAC
Suggested primer 2:CGGCATCGTGGATATGGTGA