Insertion junction: CLIP2.030804_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.030804
Chromosome:chromosome 7
Location:4709707
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g345250 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGCGCGCGGCAACACAATCATGGGCGAAGAGCACGGCAAGGCGGCAG
Internal bar code:TGCGCGTCTGGACCCTCGGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1768
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTGTGCACTCTTCAAAGC
Suggested primer 2:GTCGACATGATTGCACTCGC