Insertion junction: CLIP2.030806_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.030806
Chromosome:chromosome 9
Location:6452814
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g415050 3'UTR
Cre09.g415100 ELG25,ELG33 Exostosin-like glycosyltransferase; (1 of 2) PTHR11062//PTHR11062:SF89 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGCGCAACCCCCAAGGCCTTGCGTGTTTGCGGTGCTGCTGTGGCACTG
Internal bar code:CTAACCCCCCATTATGTCATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2808
LEAP-Seq percent confirming:36.8421
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCGTAATCCTCATCGCAG
Suggested primer 2:AGGAGAAGCAGAAGGTGTGC