Insertion junction: CLIP2.030813_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.030813
Chromosome:chromosome 13
Location:866484
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g567400 PDE16 (1 of 20) 3.1.4.17 - 3',5'-cyclic-nucleotide phosphodiesterase / Cyclic AMP phosphodiesterase; 3'%252C5'-cyclic-nucleotide phosphodiesterase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACATAATGTCAATGAACCATATGAGCAGCCCGCGCACACGTCGGAACA
Internal bar code:GGTCAGAGTACGGTTGTGCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:5358
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:141
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:141

Suggested primers for confirmation by PCR

Suggested primer 1:CTAAGGAGGCGAGGCTCATG
Suggested primer 2:AGGTGGGTAAGGTTGATGCG