Insertion junction: CLIP2.030820_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.030820
Chromosome:chromosome 3
Location:3758178
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g169350 (1 of 3) IPR007860 - DNA mismatch repair protein MutS, connector domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAATTCTTGGGCCTGCCTGCCTTCCATGCTACCTGCCAGCAGATGCCGCT
Internal bar code:TAATTGTTAGCCTATATGAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2346
LEAP-Seq percent confirming:98.3051
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:CTGACCCTCACTTTCCGCTT
Suggested primer 2:TGCGACGACTGTGGTACAAA