Insertion junction: CLIP2.030821_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.030821
Chromosome:chromosome 9
Location:1321794
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g400550 NOA1 Nitric oxide associated protein; (1 of 1) K13427 - nitric-oxide synthase, plant (NOA1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCGAAGGACGGTGGCGTTGTCACGCCACAACAGTGCACCAGCGGACGT
Internal bar code:TAATGGGGGGACAGTTTAGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:185
LEAP-Seq percent confirming:30.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTTCCCCCAAAACCCAAA
Suggested primer 2:AGGAGGAGCAGAGAGTCAGG