Insertion junction: CLIP2.030821_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.030821
Chromosome:chromosome 9
Location:1321818
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g400550 NOA1 Nitric oxide associated protein; (1 of 1) K13427 - nitric-oxide synthase, plant (NOA1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGAATCACTGAAATCAAAACAAAGCAACTCCCCCTCGCCTCGACTATA
Internal bar code:TAATGGGGGGACAGTTTAGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:219
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGGAGCAGAGAGTCAGG
Suggested primer 2:AGCTTCCCCCAAAACCCAAA