Insertion junction: CLIP2.030831_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.030831
Chromosome:chromosome 2
Location:5915687
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g117781 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCGGGCACGACTGTACGGCTGGCACGGGTGACGTATGGGTGGTCTTGA
Internal bar code:TGAGAAGAAGCCGTGTTGACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1852
LEAP-Seq percent confirming:97.4359
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:TGAATGGGTGTACGTTCCCG
Suggested primer 2:CCGCATCCCTTGTAACCCTT