Insertion junction: CLIP2.030833_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.030833
Chromosome:chromosome 12
Location:6018020
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534500 (1 of 1) PTHR20955//PTHR20955:SF1 - UNCHARACTERIZED // PROTEIN JAGUNAL HOMOLOG 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAATGCACAGCCTAGTGCGTGCGCGTGCTCAACCCCTTCCGCTGCTCTTG
Internal bar code:CAATCTGCCTGTTATTGGTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4425
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:108
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:108

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTGGTTGGGTAGGTAGGC
Suggested primer 2:TTCTGCCTGTAACCCCGAAC