Insertion junction: CLIP2.030840_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.030840
Chromosome:chromosome 7
Location:4506353
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g343650 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGGTGGCAGCTGCTGGCGCAGGAGCCGTCTATGCTCTTTCAGGAGTGC
Internal bar code:TCGTATCTCAGAGGTTGGGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3237
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TTCACGACGTACAGCAGCTT
Suggested primer 2:CCACTGTGTCAAGGCCAGAT