Insertion junction: CLIP2.030842_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.030842
Chromosome:chromosome 2
Location:2804060
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g094350 (1 of 1) PTHR23316//PTHR23316:SF30 - IMPORTIN ALPHA // SUBFAMILY NOT NAMED; Importin Alpha 1b CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGGGTTCCAACGAGGACAACAAGAGCCACATAAAGCAGGCGCTGTCG
Internal bar code:GCGGTGTTGTTTGGAGACAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3945
LEAP-Seq percent confirming:98.1132
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTCCAAGATGCCGCTAG
Suggested primer 2:GTGGGCGATGGTGAACATTG