Insertion junction: CLIP2.030842_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.030842
Chromosome:chromosome 2
Location:2804064
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g094350 (1 of 1) PTHR23316//PTHR23316:SF30 - IMPORTIN ALPHA // SUBFAMILY NOT NAMED; Importin Alpha 1b CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAACGCCAGAACCCAGGCCGCGCATGTGAGCACCTCCGTGTCCGCCGC
Internal bar code:GAGACTCCAAAGCCGGTATAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:6135
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGGCGATGGTGAACATTG
Suggested primer 2:CTCCTCCAAGATGCCGCTAG