Insertion junction: CLIP2.030844_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.030844
Chromosome:chromosome 7
Location:3574516
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g336700 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCCTAGTTTGATGCTTTGACTGTTGATGACCACCATCACTAACCAACA
Internal bar code:CAACTCTTCATAAAGCCGTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:7441
LEAP-Seq percent confirming:4.34783
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CCACAACCTGCCTCTCAGAG
Suggested primer 2:CCCAGTTGCCGTTTTGAAGG