Insertion junction: CLIP2.030844_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.030844
Chromosome:chromosome 7
Location:3574517
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g336700 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGACGGAAGGAGGCGCCCGAGAGCGGACCCATTCTGGGCATGCCAGTAT
Internal bar code:CAACTCTTCATAAAGCCGTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1125
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAGTTGCCGTTTTGAAGG
Suggested primer 2:CCACAACCTGCCTCTCAGAG