Insertion junction: CLIP2.030845_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.030845
Chromosome:chromosome 12
Location:2557522
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g506850 (1 of 2) PTHR10183//PTHR10183:SF323 - CALPAIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCGTGAGGGGCCACATTCTCGCTTGGTGCTAGATCTCGGTGCTTATG
Internal bar code:AGACTCTAAGCTTGCCCTGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:916
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TATTGTCGACTTGCCGCTGT
Suggested primer 2:CACCTTGTCAAACCACTGCG