Insertion junction: CLIP2.030846_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.030846
Chromosome:chromosome 12
Location:3505484
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g496900 (1 of 1) IPR002711//IPR003615//IPR004919 - HNH endonuclease // HNH nuclease // Domain of unknown function DUF262 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTTATGCGGCCTGCATTGACACAGGGGCGGGAGCGGGGGATTGCAGCGG
Internal bar code:GGTCGAGACGTTGCGGAACAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:5016
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGTCGCCTGCAGCATTAC
Suggested primer 2:GCCAAAGTTTCAGCAGCGAA