Insertion junction: CLIP2.030857_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.030857
Chromosome:chromosome 4
Location:1985463
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g218950 (1 of 1) IPR001841//IPR002110//IPR013083//IPR020683 - Zinc finger, RING-type // Ankyrin repeat // Zinc finger, RING/FYVE/PHD-type // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGCTGAGTCAGGACCACCACACCGTATGTCTGATGTGCTTTAGAGCAT
Internal bar code:GACACGAGAGATGCAGTGCTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1913
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCACCACCCTAAAAGGCG
Suggested primer 2:TCTCTGAGCTACCCGACGAA