Insertion junction: CLIP2.030857_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.030857
Chromosome:chromosome 4
Location:1985464
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g218950 (1 of 1) IPR001841//IPR002110//IPR013083//IPR020683 - Zinc finger, RING-type // Ankyrin repeat // Zinc finger, RING/FYVE/PHD-type // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACTCACCACCCTCCGCCGCCCCTCGCAACCACGCAGGAGTTGTGCCTG
Internal bar code:GACACGAGAGATGCAGTGCTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2986
LEAP-Seq percent confirming:90.6977
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCTGAGCTACCCGACGAA
Suggested primer 2:ATCCACCACCCTAAAAGGCG