Insertion junction: CLIP2.030870_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.030870
Chromosome:chromosome 2
Location:3480461
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g099050 SRR30 (1 of 20) IPR001190//IPR017448 - SRCR domain // SRCR-like domain; Scavenger receptor cysteine-rich protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTAGGCGAGCCTGGGTACTCCGCACCCACGGTGCCTAGTTCCATCTTTG
Internal bar code:AACATTTGGAAATTCCCCTAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3490
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAACTCACATGTGCGGTA
Suggested primer 2:CTGGCCAGACCCTGTAAGTG