Insertion junction: CLIP2.030873_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.030873
Chromosome:chromosome 17
Location:5793927
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g741250 PHR1,PHR6 (1 of 1) 2.5.1.77 - 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase; 7%252C8-didemethyl-8-hydroxy-5-deazariboflavin synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTAACATGAACGGCTACCCCCCATGGGACTTACCGTGTTCGTTGGGCT
Internal bar code:GTAATAGCTGATGTTACAGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1195
LEAP-Seq percent confirming:86.9565
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TGTAGGAGCGGTTGAAGCAG
Suggested primer 2:GTGACTTCGTTACCATGCGC