Insertion junction: CLIP2.030875_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.030875
Chromosome:chromosome 2
Location:4232938
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g104400 (1 of 1) IPR000104//IPR005033 - Antifreeze protein, type I // YEATS CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGAGGGAGCTGCAGCCGCCGGTGGCGATGTGGACGCGGCCGGCAGCCC
Internal bar code:GCAACCGTTACTCTTTAGTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2057
LEAP-Seq percent confirming:97.8261
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGAAGAGGAAGAGGTAGC
Suggested primer 2:CTGCTCCAACACTAACCGGT