Insertion junction: CLIP2.030876_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.030876
Chromosome:chromosome 10
Location:3405243
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g443950 (1 of 2) PF04564//PF05049 - U-box domain (U-box) // Interferon-inducible GTPase (IIGP) (IIGP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGGACTTGCCAGGGGCCGGCACGACCGAGTGCCCCGCCGCGCAGTACT
Internal bar code:GCGTTGGCACCACGGGGACCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2179
LEAP-Seq percent confirming:80.9524
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGGAGCCTTTAGGTGGTG
Suggested primer 2:AACTGCTCTCATGCGAACCA