Insertion junction: CLIP2.030877_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.030877
Chromosome:chromosome 2
Location:1581077
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g084873 (1 of 70) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCGGAGCAGTGCCCGGTTTGGGCCCCGCCCCAACCTGCTGATGCAACC
Internal bar code:ACAAATGTCGCTGTGGGACACC

Confirmation - LEAP-Seq

LEAP-Seq distance:4805
LEAP-Seq percent confirming:85.8824
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTTGTTGGCTGCTATGGG
Suggested primer 2:GTCGGGAGGGTAGAGTGAGT