Insertion junction: CLIP2.030884_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.030884
Chromosome:chromosome 10
Location:734565
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g422500 (1 of 1) PF09113 - Peptide-N-glycosidase F, C terminal (N-glycanase_C) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATTCCAAGCATATGGTTGTGGCCGTAGCCATGCCTGTGACTGCAGCCTC
Internal bar code:CAATAGTTAGAATCGGGGGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1256
LEAP-Seq percent confirming:35.7143
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCTACAGCCTCAGATCGC
Suggested primer 2:CTGACTGGCTTCATGTCGGT