Insertion junction: CLIP2.030892_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.030892
Chromosome:chromosome 4
Location:2845373
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g224200 (1 of 2) PTHR18841//PTHR18841:SF0 - VITELLINE MEMBRANE OUTER LAYER PROTEIN I-RELATED // PROTEIN C08G5.3, ISOFORM A-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCATGTCTGCCATGTATGGTGTGCTGGCGGGCCCATGCGGCTCTCCGA
Internal bar code:AAGTAGTTCCTTAATTCTGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3814
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCCGCTGATAGTCCAGAG
Suggested primer 2:GATTGACGCTGCAGCTCATG