Insertion junction: CLIP2.030896_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.030896
Chromosome:chromosome 15
Location:641383
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g636896 (1 of 1) PTHR11082//PTHR11082:SF29 - TRNA-DIHYDROURIDINE SYNTHASE // TRNA-DIHYDROURIDINE SYNTHASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCCGGCAACCCGGTTGCTGAGGACAAACACACACGGCTGCAACCAGAC
Internal bar code:GCGGGTGAGAGCAGTGTAATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1619
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGGACGGACGTTCACTTC
Suggested primer 2:AAACCACACACCCACCCAAT