Insertion junction: CLIP2.030897_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.030897
Chromosome:chromosome 6
Location:7350898
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g299850 HLM10 (1 of 2) K11426 - SET and MYND domain-containing protein (SMYD); Histone-lysine N-methyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAGCTGGAGCGCACGCGGCGGGAGGAGCAGCGGGCTGCGGCGGCACGG
Internal bar code:TTGTTTATACGCTGGCAGTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1238
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTTTTGCTGACGCGCATT
Suggested primer 2:CGTGTGTTTCTGCTGGTGTG