Insertion junction: CLIP2.030900_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.030900
Chromosome:chromosome 12
Location:9867454
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g544752 (1 of 26) IPR013026//IPR019734 - Tetratricopeptide repeat-containing domain // Tetratricopeptide repeat intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACATGCCTGCCGCCCTCCCGACCACGGTGTCTGGTTCCAAACCTGGAT
Internal bar code:ACTTTGCTTACTGTTTGCCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:4247
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GTGAGTCATTTGGGCAGGGA
Suggested primer 2:ACTACCCAATTGCAGCCTCC