Insertion junction: CLIP2.030902_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.030902
Chromosome:chromosome 7
Location:1783102
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325724 PTP1 Protein tyrosine phosphatase 1; (1 of 1) K18078 - protein tyrosine phosphatase domain-containing protein 1 [EC:3.1.3.-] (PTPDC1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCATGGCGGCAGCACAGGTCTTCCAGCCCCCGCCGCCGCCCGCAGCGC
Internal bar code:TTACTCTTATCTCTCGGTGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3809
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCTCCGTTTCCGACCCTG
Suggested primer 2:ATGAATGGGCTTGAAGCGGA