Insertion junction: CLIP2.030914_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.030914
Chromosome:chromosome 16
Location:2383474
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g659550 (1 of 3) 2.4.1.228 - Lactosylceramide 4-alpha-galactosyltransferase / Histo-blood group P(k) UDP-galactose CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACACGGCCAGGAACCCGCAGCACGTGGAGGGCGGGGCAGCGCAGGAGC
Internal bar code:AATGCGCCTTTTGGGGCACTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1838
LEAP-Seq percent confirming:97.4359
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTGCGACATGATTGTGAG
Suggested primer 2:GGTGCATTTCAGGATGGGGA