Insertion junction: CLIP2.030924_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.030924
Chromosome:chromosome 2
Location:6669653
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g387060 (1 of 1) K08202 - MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 4/5 (SLC22A4_5, OCTN) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCCACACGCCCTGGCCTGCCCTGCATTGCCCTGTCCTGTCCTGTCCTG
Internal bar code:TGCAAGGCGGGCTGAGGCTAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3420
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CACACCACCATCCACACGTA
Suggested primer 2:TCATCGGCAGCGGAGTATTC