Insertion junction: CLIP2.030927_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.030927
Chromosome:chromosome 10
Location:6747286
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g467100 (1 of 1) PTHR31633//PTHR31633:SF1 - FAMILY NOT NAMED // H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGGCGGCCCGTGCGGCGGAGGAGCGCCGTACTGCTGCGGCGCCTGCTG
Internal bar code:AGCATGACGGGATTCTGGCTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:178
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGACCATGATAGTGGCCG
Suggested primer 2:CGGCAGGGAGTTTTGTGTTG