Insertion junction: CLIP2.030930_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.030930
Chromosome:chromosome 6
Location:3598378
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278131 (1 of 1) IPR000104//IPR002083//IPR008974 - Antifreeze protein, type I // MATH/TRAF domain // TRAF-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGGCGGACAGTGCAGGGCAAGTGGGATAGGGCTCAAACACGTTTCCCT
Internal bar code:GCTGTTGTTAAGTCTCGTAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1640
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTGGAACTGTGTTGCTGC
Suggested primer 2:TTGCCGGTTATGGATGTGCT