Insertion junction: CLIP2.030934_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.030934
Chromosome:chromosome 1
Location:1569586
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g008500 (1 of 2) PF12796//PF13857 - Ankyrin repeats (3 copies) (Ank_2) // Ankyrin repeats (many copies) (Ank_5) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATCCAGGCACAGACTGGTCAAGGGTGGAGCCGGCGGAGGCCCTTGGTGG
Internal bar code:AGGGCTCGTAAGGTTAGCTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:268
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TACGTGTGTCACAGAGCACC
Suggested primer 2:ACGAAGGGAAAGAGTGGCAG