Insertion junction: CLIP2.030939_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.030939
Chromosome:chromosome 3
Location:3838235
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g170150 (1 of 2) PTHR10857//PTHR10857:SF0 - COPINE // PROTEIN GEM-4 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTCACCCCAGTCCCAGGCAAACCGCACGGGGACCCCCCTCCTTCCACC
Internal bar code:TTGGTCCATCATAAGTGTCAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1924
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GGATATTGAGGCCCAGGAGC
Suggested primer 2:ACATTTTCCTTGCCGTGTGC