Insertion junction: CLIP2.030942_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.030942
Chromosome:chromosome 16
Location:4919931
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g686750 PTA3 (1 of 10) IPR005828//IPR020846 - Major facilitator, sugar transporter-like // Major facilitator superfamily domain; Proton/phosphate symporter intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAAAGGGAGTTAAGTGCTGAAGGCAAGCTGCAGGTCAGGCATGTAGGCA
Internal bar code:AAGTTCATCAGACTGTGAGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1497
LEAP-Seq percent confirming:68.4211
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GGCATGGTGCGTAATCGAAC
Suggested primer 2:GAGTAGGGAGACGGTGGAGT