Insertion junction: CLIP2.030945_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.030945
Chromosome:chromosome 2
Location:1792685
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g086750 (1 of 1) PTHR12709:SF5 - DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA43 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGTGCGATGCAGCGGATACGGCACGCAGGGTGTGTTTGAATGGGTATG
Internal bar code:CGGTCGGCTCGATTGTAAGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3312
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GACGGAGAGACAACGGACTC
Suggested primer 2:TACACGGGACTTGACACACG