Insertion junction: CLIP2.030945_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.030945
Chromosome:chromosome 14
Location:3619620
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g631000 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTACGTACATCATGTTTACATCGTGAAACGGCTTCCCTCTGCTTGCCAT
Internal bar code:GAGTGGTCGGTCTACATTAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2576
LEAP-Seq percent confirming:79.5181
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:AGATGGCGGTGTTGGGTAAG
Suggested primer 2:TCGGCAAAGTCATTTCGGGA