Insertion junction: CLIP2.030947_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.030947
Chromosome:chromosome 4
Location:3734884
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g229350 (1 of 1) 2.1.1.290 - tRNA(Phe) (7-(3-amino-3-carboxypropyl)wyosine(37)-O)-methyltransferase / tRNA-yW synthesizing enzyme-4 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCGGGAGACCGCGGGAGACCGGCACACTGTCTTCCTGCCTTCGCTGC
Internal bar code:GATCCATTACTCTATTGCACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2527
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:ATTTGGAAAGCGGCTCAGGA
Suggested primer 2:GCAACCGCAGAGAAAATGCA