Insertion junction: CLIP2.030959_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.030959
Chromosome:chromosome 11
Location:3992668
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g801331 (1 of 80) IPR003882 - Pistil-specific extensin-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACTGGAAGGTGCCGCACAGCCTAAGCGAGTTGTCGGAGCACTCAGTGA
Internal bar code:AGGAGTGGGCTTGGGATGAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1665
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGCCACCTGATTAGCAGT
Suggested primer 2:TGTGACCGAATGAACCCAGG