Insertion junction: CLIP2.030964_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.030964
Chromosome:chromosome 9
Location:3035028
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393691 KDG4 (1 of 1) 2.7.1.138 - Ceramide kinase / Acylsphingosine kinase; Diacylglycerol/ceramide/sphingosine kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGAACGGCCGGATGGGGCAGAGGGAGGAAGGGGGGGAAGGGGAGGAA
Internal bar code:ATAGTGTAAGGGTGTGGGTACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1430
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGTTCATCTTCCCGCTGT
Suggested primer 2:CCTCTTGCACACCACAAAGC