Insertion junction: CLIP2.030971_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.030971
Chromosome:chromosome 1
Location:3335150
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g021550 (1 of 4) PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTGCAATCCGTCATGAGTGCGCCCGCGAGCCCAGCCCAACGTCAACAC
Internal bar code:CTGTGATGAACAGTCTGGTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3802
LEAP-Seq percent confirming:96.2617
LEAP-Seq n confirming:103
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:107

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGTGTACCCCAACATGGC
Suggested primer 2:AACTGCAAACATCACACGGC