Insertion junction: CLIP2.030972_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.030972
Chromosome:chromosome 12
Location:3336002
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g498600 EEF1,EEF1A1 (1 of 3) K03231 - elongation factor 1-alpha (EEF1A); Eukaryotic translation elongation factor 1 alpha intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCCGCCTTGCCCCCCTGTACTCCAGCCGTGAGCCTTACCGGGGGCGTC
Internal bar code:CCTCCATATGCCGTGTTGGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1817
LEAP-Seq percent confirming:97.3684
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:AATGTCTGAGGGCAAGGAGC
Suggested primer 2:GTGGTCACCCTTCTGGATGG