Insertion junction: CLIP2.030987_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.030987
Chromosome:chromosome 3
Location:1441718
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g151100 SSA15 cilia-sensing, structure and/or assembly; (1 of 2) PTHR22904//PTHR22904:SF312 - TPR REPEAT CONTAINING PROTEIN // CARBOXYLATE CLAMP-TETRATRICOPEPTIDE REPEAT PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCCCCCACCAGCTCACCCCACACCCGCACCCCGCACCATGCACCCTT
Internal bar code:CTTTTTGTTAAATAGGGGGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:364
LEAP-Seq percent confirming:70.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTTCTTCCTTGACGTCCC
Suggested primer 2:CAGCGCGCTTACAGTTACAC