Insertion junction: CLIP2.030989_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.030989
Chromosome:chromosome 8
Location:4033307
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g382650 UBQ4 (1 of 2) K09313 - homeobox protein cut-like (CUTL); Bi-ubiquitin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGGCCGCCAAAGTTGGGGGGTCGGTCCTCGTCCCTGGGGGTCCGTCGG
Internal bar code:TCACCGCCTCGGCTACACAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2030
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGACGAATGGACAATCG
Suggested primer 2:GGTTGCTCCAGTCGCTTACT